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TOPIC: encountering an issue while compiling Telemac in Macbook 2024
encountering an issue while compiling Telemac in Macbook 2024 3 weeks 1 day ago #46050
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The issue seems to occur while building python api.I sued homebrew to install Python version 3.9. Then I installed numpy version 2.0.2 with pip. The compilation fails with saying that, f2py3:command not found error. I have been trying to install telemac version v8p3r0 now. I also tried installing telemac version v8p4r0 with python versions 3.12, 3.11 but nothing worked. the full error message (
 Any insights or solution would greatly appreciated. |
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encountering an issue while compiling Telemac in Macbook 2024 21 hours 34 minutes ago #46197
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I'm having the same issue when compiling telemac (tried v8.3, v8.4 and v8.5) on a linux cluster. I attached my cfg file here.
The python versions I use/have tried are 3.11.11 and 3.10.16. Numpy: 1.21.6; 1.22.0; 1.23; 1.24; 1.26.4; 2.0.0; 2.0.2; 2.2.2 I also tried both "f2py_name : f2py" and "f2py_name : f2py3" in the cfg file No luck in getting python api compiled so far... Building the Python API ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~> Wrap_api built ~> Generating the API Python wrapper Traceback (most recent call last): File "/projects/illinois/eng/cee/mhgarcia/opentelemac/scripts/python3/compilation/compil_tools.py", line 954, in compile_api_f2py output = check_output(cmd, shell=True, stderr=STDOUT) File "/sw/apps/python/3.10.16/lib/python3.10/subprocess.py", line 421, in check_output return run(*popenargs, stdout=PIPE, timeout=timeout, check=True, File "/sw/apps/python/3.10.16/lib/python3.10/subprocess.py", line 526, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command 'f2py #f2py for new python and numpy --quiet -h /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/lib/api.pyf -m _api /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_handle_var_t3d.f90 /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_handle_var_t2d.f90 /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_handle_var_art.f90 /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_handle_var_wac.f90 /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_handle_error.f90 /projects/illinois/eng/cee/mhgarcia/opentelemac/builds/gfortranHPC/wrap_api/src/api_interface.f90 skip: get_boolean_t2d_d get_double_t2d_d get_integer_t2d_d get_string_t2d_d get_var_size_t2d_d set_boolean_t2d_d set_double_t2d_d set_integer_t2d_d set_string_t2d_d get_double_array_t2d_d get_integer_array_t2d_d set_double_array_t2d_d set_integer_array_t2d_d get_boolean_t3d_d get_double_t3d_d get_integer_t3d_d get_string_t3d_d get_var_size_t3d_d set_boolean_t3d_d set_double_t3d_d set_integer_t3d_d set_string_t3d_d get_double_array_t3d_d get_integer_array_t3d_d set_double_array_t3d_d set_integer_array_t3d_d get_boolean_art_d get_double_art_d get_integer_art_d get_string_art_d get_var_size_art_d set_boolean_art_d set_double_art_d set_integer_art_d set_string_art_d get_double_array_art_d get_integer_array_art_d set_double_array_art_d set_integer_array_art_d get_boolean_wac_d get_double_wac_d get_integer_wac_d get_string_wac_d get_var_size_wac_d set_boolean_wac_d set_double_wac_d set_integer_wac_d set_string_wac_d get_double_array_wac_d get_integer_array_wac_d set_double_array_wac_d set_integer_array_wac_d :' returned non-zero exit status 127. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/projects/illinois/eng/cee/mhgarcia/opentelemac/scripts/python3/compile_telemac.py", line 152, in <module> main() File "/projects/illinois/eng/cee/mhgarcia/opentelemac/scripts/python3/compile_telemac.py", line 144, in main compile_api_files(silent=not options.verbose, File "/projects/illinois/eng/cee/mhgarcia/opentelemac/scripts/python3/compilation/compil_tools.py", line 1034, in compile_api_files compile_api_f2py('api', api_dir, source_api, skip_source, ld_flags, File "/projects/illinois/eng/cee/mhgarcia/opentelemac/scripts/python3/compilation/compil_tools.py", line 956, in compile_api_f2py raise TelemacException(\ utils.exceptions.TelemacException: Error during the first part of F2PY: 127 /bin/sh: line 1: f2py: command not found Since I suspected it's a f2py issue, I did a test on f2py by having it compile a simple f90 script in python3 and it worked. The directory of numpy is in PYTHONPATH. Any hint would be greatly appreciated! Thanks! Jason
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encountering an issue while compiling Telemac in Macbook 2024 20 hours 32 minutes ago #46198
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A quick update- I successfully compiled telemac using anaconda with the same cfg file above. Python version is 3.13.1 and numpy = 2.2.2.
I removed the PYTHONPATH to the original python in the pysource...sh file (attached).
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