Hi Tim,
Point ID's are only helpful to the user (if he wants to distinguish between them), in case of an error or not used at all. I believe TOMAWAC ignores them and uses internal numbering (increasing from 1).
What I did so far is to create a .dat from certain points on my ARTEMIS open boundary
That is correct. I think a problem can occur if you ask for a point outside the TOMAWAC mesh (probably endpoints of the ART boundary). Have you checked that?
There used to be a limit of 99 points but that had been corrected at some point. I don't know if it is in v8p1r0. Other than that, having a large number of spectrum points (within reason) shouldn't be a problem, though it is certainly a waste of effort and space.
Costas