Hi Clemens
Sorry for this late reply, I was busy these two days.
About the CPU time, first of all you have to be sure that you are using exactly the same parameters (CFL number, simulation time, order of the scheme etc.) in both cases. If it is the case, I think that you should have almost the same CPU time.
I have updated some routines which influences the time step computation, but the resulting CPU time is expected to be almost the same as for the V6P0 version.
In the V6P1 release, you have the option to use a second order explicit time scheme (called Newmark scheme) by chosing the key word "Newmark time integration coefficient" = 0.5. The default value is set to 1. which gives the classic Euler first order scheme. If you use second order time scheme you may increase your CPU time.
An other probable cause of increasing the CPU is the use of second order kinetic scheme. This latter needs roughly two to four times CPU than the first order (kinetic or Roe) schemes.
About your second remark, you're right: while the inflow prescription is not the same in the two versions and because of several slight updates in various subroutines, the final result undoubtedly changes.
I hope that I was clear enough, if it is not the case, please do not hesitate to write me.
King regards
Riadh