Hello,
The problem with estuaries is to have a well posed problem, and if you prescribe the water elevation it may be unstable when the flow gets in, so you may want to try the Thompson boundary conditions. The choice of the turbulence model comes after, however check that the crash is not due to inf-sup condition, with checker-board oscillations of the free surface, in which case choosing : FREE SURFACE GRADIENT COMPATIBILITY : between 0.9 and 0. would help.
With best regards,
Jean-Michel Hervouet