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Read non-erodible map from geometry file (noerod.f)
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TOPIC: Read non-erodible map from geometry file (noerod.f)

Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14030

  • cyamin
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Hello Christian,

It seems to me more like a Windows issue rather that a telemac one. Have you checked your folder permissions? Or try to run the computation as an Administrator.

Regards,
Costas
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14031

  • mafknaapen
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Hi Christian,

This is a windows issue. For some reason it windows does not allow programs to copy txt files. remname the liquid boundary file to .lbf and it should run fine (I think).

Michiel
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14032

  • cschwarz
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Hallo Michiel and Costa,

Thank you both for your fast reply.

Regarding your responses:
I have checked folder permissions and I am the Administrator, so I think that should not be the issue.
Further did I rename the liquid boundary file into *.lbf, but unfortunately still experience the same error.

I also tried to change declarations from T2D to SIS, which still caused the same error?

The simulation runs fine without the noerod.f so I think it has to be somehow linked to this fortran file or the coupling of it...

Any suggestions, or maybe a way to work around it

Best Regards,
Christian
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14033

  • cschwarz
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Dear all,

I now tried to run the model on a cluster, getting an error from SIGSEGV for wrong memory allocation(see below).

Is this due to the definitions in noerod.f?

Best Regards,
Christian

Output Simulation:

================================================================================
ITERATION 0 TIME: 0.0000 S
TELEMAC2D COUPLED WITH: SISYPHE
TELEMAC-2D: INTERNAL COUPLING WITH SISYPHE
PART 0 : INITIALISING SISYPHE
INBIEF (BIEF): NOT A VECTOR MACHINE (ACCORDING TO YOUR DATA)

LIQUID BOUNDARIES: 1
STRCHE (BIEF): NO MODIFICATION OF FRICTION

INITIALISATION EN CAS DE COUPLAGE : PART= 0
4 total processes killed (some possibly by mpiexec during cleanup)
_____________
runcode::main:
:
|runCode: Fail to run
|mpiexec -wdir /data/antwerpen/202/vsc20238/MfSMRunSmall_Sed_noerod/t2dMfsmSmall.cas_2014-08-19-13h16min08s -n 12 out_noerodBK
|~~~~~~~~~~~~~~~~~~
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|
|Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
|
|Backtrace for this error:
|#0 0x2B8E54F9A397
|#1 0x2B8E54F9A99E
|#2 0x323BE302CF
|#3 0x5ABD30 in find_in_sel_
|#4 0x4027B6 in noerod_
|#5 0x54B191 in sisyphe_
|#6 0x41854C in telemac2d_
|#0 0x2AD52BB33397
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#1 0x2AD52BB3399E
|#2 0x323BE302CF
|#3 0x5ABD30 in find_in_sel_
|#0 0x2AD1D4F2C397
|#1 0x2AD1D4F2C99E
|#4 0x4027B6 in noerod_
|#2 0x323BE302CF
|#0 0x2B3A183B4397
|#5 0x54B191 in sisyphe_
|#1 0x2B3A183B499E
|#0 0x2B99B1387397
|#1 0x2B99B138799E
|#0 0x2ADF05813397
|#0 0x2B7B432ED397
|#1 0x2B7B432ED99E
|#2 0x323BE302CF
|#0 0x2B659D087397
|#1 0x2B659D08799E
|#3 0x5ABD30 in find_in_sel_
|#2 0x323BE302CF
|#1 0x2ADF0581399E
|#2 0x323BE302CF
|#6 0x41854C in telemac2d_
|#2 0x323BE302CF
|#4 0x4027B6 in noerod_
|#3 0x5ABD30 in find_in_sel_
|#3 0x5ABD30 in find_in_sel_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#3 0x5ABD30 in find_in_sel_
|#2 0x323BE302CF
|#3 0x5ABD30 in find_in_sel_
|#5 0x54B191 in sisyphe_
|#4 0x4027B6 in noerod_
|#4 0x4027B6 in noerod_
|#4 0x4027B6 in noerod_
|#4 0x4027B6 in noerod_
|#6 0x41854C in telemac2d_
|#5 0x54B191 in sisyphe_
|#5 0x54B191 in sisyphe_
|#5 0x54B191 in sisyphe_
|#0 0x2B86FF2ED397
|#3 0x5ABD30 in find_in_sel_
|#1 0x2B86FF2ED99E
|#5 0x54B191 in sisyphe_
|#6 0x41854C in telemac2d_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#0 0x2AD808B39397
|#1 0x2AD808B3999E
|#6 0x41854C in telemac2d_
|#2 0x323BE302CF
|#6 0x41854C in telemac2d_
|#2 0x323BE302CF
|#4 0x4027B6 in noerod_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#6 0x41854C in telemac2d_
|#5 0x54B191 in sisyphe_
|#3 0x5ABD30 in find_in_sel_
|#3 0x5ABD30 in find_in_sel_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#4 0x4027B6 in noerod_
|#4 0x4027B6 in noerod_
|#6 0x41854C in telemac2d_
|#5 0x54B191 in sisyphe_
|#5 0x54B191 in sisyphe_
|#6 0x41854C in telemac2d_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#6 0x41854C in telemac2d_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|#0 0x2B0B55937397
|#1 0x2B0B5593799E
|#2 0x323BE302CF
|#3 0x5ABD30 in find_in_sel_
|#4 0x4027B6 in noerod_
|#5 0x54B191 in sisyphe_
|#0 0x2B90C7333397
|#1 0x2B90C733399E
|#2 0x323BE302CF
|#6 0x41854C in telemac2d_
|#3 0x5ABD30 in find_in_sel_
|#4 0x4027B6 in noerod_
|#5 0x54B191 in #7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|sisyphe_
|#6 0x41854C in telemac2d_
|#7 0x402B92 in MAIN__ at homere_telemac2d.f:0
|
|mpiexec noticed that process rank 5 with PID 2558 on node r2e2cn21 exited on signal 11 (Segmentation fault).
|
|~~~~~~~~~~~~~~~~~~

===== start of epilogue =====
Date : Tue Aug 19 13:16:13 CEST 2014
Session ID : 2296
Resources Used : cput=00:00:11,mem=0kb,vmem=0kb,walltime=00:00:11
Allocated Nodes : r2e2cn21
Job Exit Code : 1
charging credits
Node Type : westmere
Nodes Used : 1
Processors Used : 12
Time Used : 11 seconds
Charged : 0.14 credits (ticket #532863)
===== end of epilogue =======
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14035

  • cyamin
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Can you try this modified fortran file? I made some corrections.

File Attachment:

File Name: noerodBK_v2.f
File Size: 3 KB


Regards,
Costas
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14036

  • cschwarz
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Hallo Costa,

Now it works.

Thanks a lot, it indeed was the space of the fformat('SERAFIN ').

Best Regards,
Christian
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14037

  • cyamin
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Yes, tricky bit. You had also forgotten to DEALLOCATE(W).

Regards,
Costas
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Read non-erodible map from geometry file (noerod.f) 10 years 3 months ago #14039

  • cschwarz
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Indeed, Thanks again,

Best Regards,
Christian
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Read non-erodible map from geometry file (noerod.f)

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