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TOPIC: v8p3r0 failed to run any examples in parallel
v8p3r0 failed to run any examples in parallel 2 years 7 months ago #40135
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Hi,
I compiled telemac-mascrate v8p3r0 version and the compilation works fine. But when I try to run the example in diractory /example/telemac2d/gouttedo using the command telemac2d.py t2d_gouttedo.cas --ncsize=4. it pops with the following error: Running your CAS file(s) for:
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gfortranHPC:
+> Gfortran compiler 11.2.0 with mpich 3.1.4
+> root: /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0
+> module: ad / api / artemis / bief
damocles / gaia / gretel / hermes
identify_liq_bnd / khione / mascaret / nestor
parallel / partel / postel3d / sisyphe
special / stbtel / telemac2d / telemac3d
tomawac / waqtel
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
... processing the steering file
... checking parallelisation
... handling temporary directories
copying: t2d_gouttedo.cas -> <root>/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/T2DCAS
copying: telemac2d.dico -> <root>/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/T2DDICO
copying: geo_gouttedo.cli -> <root>/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/T2DCLI
copying: geo_gouttedo.slf -> <root>/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/T2DGEO
[ ] 0[\\\\\\\\\\\\\\\\\\\\\\ ] [ ] 0[\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [ ] 0[\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ]
... partitioning base files (geo, conlim, sections, zones and weirs)
[ ] 0[\\\\\ ] [\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] [\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ ] +> /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/builds/gfortranHPC/bin/partel < partel_T2DGEO.par >> partel_T2DGEO.log
Current memory used: 0 bytes
Maximum memory used: 0 bytes
***Memory allocation failed for CreateGraphDual: nptr. Requested size: 9208409919624 bytes
STOP 0
... splitting / copying other input files
... checking the executable
> compiling objs
compiling: user_condin_h.f ... completed
compiling: user_condin_trac.f ... completed
created: out_user_fortran
Running your simulation(s) :
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s:
mpirun -n 4 /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/out_user_fortran
MASTER PROCESSOR NUMBER 0 OF THE GROUP OF 4
EXECUTABLE FILE: /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/A.EXE
LISTING OF TELEMAC2D------------------------------------------------------------------------------
TTTTT EEEEE L EEEEE M M AAAAA CCCCC
T E L E MM MM A A C
T EEE L EEE M M M AAAAA C
T E L E M M A A C
T EEEEE LLLLL EEEEE M M A A CCCCC
2D VERSION V8P3 FORTRAN 2003
~^~^~^~^~^~^~^~^~^~^~^^~^~^~^~^~^~
~ ~
\ ' o '
/\ o \ o
>=)'> ' /\ '
\/ \ >=)'> ~
/ /\ \/
~ >=)'> / .
\/ )
/ (
~ ) )
} ~ ( ( (
{ ) ) )
} } . ( ( (
{ { /^^^^^^^^^^^^
^^^^^^^^^\ /
^^^^^^^^^
WARNING IN DICTIONARY:
FOR KEYWORD: FINITE VOLUME SCHEME FOR TRACER DIFFUSION
THE NUMBER OF DEFAULT VALUES 1 IS DIFFERENT FROM THE DECLARED SIZE 2
DIFFERENT NUMBER OF PARALLEL PROCESSORS:
DECLARED BEFORE (CASE OF COUPLING ?): 4
TELEMAC-2D : 0
VALUE 4 IS KEPT
********************************************
* LECDON: *
* AFTER CALLING DAMOCLES *
* CHECKING OF DATA READ *
* IN THE STEERING FILE *
********************************************
EXITING LECDON. NAME OF THE STUDY:
TELEMAC 2D: DROPLET IN A BASIN
OPENING FILES FOR TELEMAC2D
OPENING: T2DGEO-geo_gouttedo.slf
OPENING: T2DCLI-geo_gouttedo.cli
OPENING: T2DRES-r2d_gouttedo_v1p0.slf
*****************************
* MEMORY ORGANIZATION *
*****************************
READ_MESH_INFO: TITLE= TELEMAC 2D : GOUTTE D'EAU DANS UN BASSIN$
NUMBER OF ELEMENTS: 8710
NUMBER OF POINTS: 4624
TYPE OF ELEMENT: TRIANGLE
TYPE OF BND ELEMENT: POINT
SINGLE PRECISION FORMAT (R4)
Abort(2) on node 2 (rank 2 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 2) - process 2
Abort(2) on node 3 (rank 3 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 2) - process 3
Traceback (most recent call last):
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/telemac2d.py", line 7, in <module>
main('telemac2d')
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/runcode.py", line 279, in main
run_study(cas_file, code_name, options)
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/execution/run_cas.py", line 169, in run_study
run_local_cas(my_study, options)
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/execution/run_cas.py", line 65, in run_local_cas
my_study.run(options)
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/execution/study.py", line 637, in run
self.run_local()
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/execution/study.py", line 465, in run_local
run_code(self.run_cmd, self.sortie_file)
File "/es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/scripts/python3/execution/run.py", line 182, in run_code
raise TelemacException('Fail to run\n'+exe)
utils.exceptions.TelemacException: Fail to run
mpirun -n 4 /es01/home/jnist10/chengqz/software/telemac_mascaret/telemac-mascaret-v8p3r0/examples/telemac2d/gouttedo/t2d_gouttedo.cas_2022-04-01-14h28min01s/out_user_fortranI am using Python 3.8 gcc11.2.0 mpich 3.4.2 I tried to compile it with different versions of mpich, they all raise the same error with no specific indication. I attached the cfg file and my pysource script. Could somebody help me please Best regards.
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