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compilation of version v7p1r0
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TOPIC: compilation of version v7p1r0

compilation of version v7p1r0 8 years 10 months ago #19246

  • o.gourgue
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I try to compile the new version v7p1r0 on my MacBook Air (Mac OS), but it stops with the following error message:
ld: archive has no table of contents file '/Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/lib/utils/parallel/homere_partel.a' for architecture x86_6I 4
collect2: error: ld returned 1 exit status
compileTELEMAC::main:
      +> creating executable: homere_partel:
   |createExeFiles: something went wrong, I am not sure why (runcode=1).
   |      
   |... The following command failed for the reason above (or below)
   |gfortran-mp-4.9 -fconvert=big-endian -frecord-marker=4 -v -o /Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/bin/partel declarations_partel.o partitioner.o partel.o parres.o homere_partel.o  /Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/lib/utils/bief/homere_partel.a /Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/lib/utils/hermes/homere_partel.a /Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/lib/utils/parallel/homere_partel.a /Users/ogourgue/Applications/telemac/v7p1r0/builds/serial/lib/utils/special/homere_partel.a 
   |

For information, it works with previous versions. I just tested version v7p0r1 with the same configuration to be sure, and it does work.

Any idea where the problem comes from?

Thank you for your help.
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compilation of version v7p1r0 8 years 10 months ago #19247

  • sebourban
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Hello,

I cannot reproduce your error -- can we see your configuration file ?

Thank you,
Sébastien
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compilation of version v7p1r0 8 years 10 months ago #19248

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... Could it be that you are still pointing to your v7p0 python directories ?

(compileTELEMAC.py has changed slightly, in particular the order with which we compile PARTEL).

Try making sure your python points to the new v7p1r0/scripts ...

Hope this helps,
Sébastien.
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compilation of version v7p1r0 8 years 10 months ago #19249

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Thank you Sébastien.

In attachment, the configuration file and the script to compile the code.

I am pointing to the new python directories.


edit: .txt is not the correct file extension, but the forum did not allow to upload it otherwise
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compilation of version v7p1r0 8 years 10 months ago #19250

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Ah -- you now have to also include special (together with parallel) ... in every parallel compilation.

incs_parallel:      -I /opt/local/include/openmpi-gcc49/
incs_special:       -I /opt/local/include/openmpi-gcc49/

Do recompile using --clean and confirm OK.

Sébastien


PS: Note that the following key are not necesssary anymore:
- root (which allows you to transfer the same config file from one version to another)
- version
- options (we are now looking for the appropriate cmd_* to see what is meant)
- par_cmdexec (PARTEL is now used by default, as opposed to its python equivalent)
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compilation of version v7p1r0 8 years 10 months ago #19252

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Unfortunately, the problem arises when compiling the "serial" configuration.

Before making the changes you suggested, I got another error message with the "parallel" configuration, arising much earlier.

Now, I have the same error message as in "serial" and "parallel".
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compilation of version v7p1r0 8 years 10 months ago #19258

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Hello,

I have tried to use your configuration file as is (replacing only my path in the root key) and it works fine on my windows+gfortran system, compiling successfully the serial configuration.

I have also tried on a Linux+gfortran system (Fedora, as I do not have a Mac) and this work fine too.

I doubt it is because of your Mac -- especially since it works with v7p0. In the serial configuration, there are no external libraries, so it cannot be the reason. You configuration file seems fine.

I do not understand ...
Can anyone else reproduce this error ?

All this seems to point to is the system configuration (PATH/SYSTELCFG/root). Can you try using the -r options and the -f option as well as -c serial, if possible, just to check ... ?

Sébastien.
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compilation of version v7p1r0 8 years 10 months ago #19265

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A similar configuration file works indeed on our Linux cluster.

As you suggested Sébastien, I adapted my compilation script using the -r and -f options:

#!/bin/bash

export SYSTELCFG=/Users/ogourgue/Applications/telemac/my_configs/systel.seldon.v7p1r0.cfg

python2.7 /Users/ogourgue/Applications/telemac/v7p1r0/scripts/python27/compileTELEMAC.py -c serial -r /Users/ogourgue/Applications/telemac/v7p1r0 -f /Users/ogourgue/Applications/telemac/my_configs/systel.seldon.v7p1r0.cfg

Unfortunately, that dit not solve the problem...
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compilation of version v7p1r0 8 years 10 months ago #19266

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OK -- thanks for trying.

Last resort -- would you be able to redirect the full screen output to a txt file and share this with us ?

Thanks,
Sébastien.
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compilation of version v7p1r0 8 years 10 months ago #19267

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Full screen output in attachment.
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