Hello,
If I understand well your question, probably your model behavior and observed result has a physical sense. In fact, the non-linearity associated to the sediment size (weight) and its relationship with the settling velocity computation makes that, under particular flow conditions (forcing), your model delivers this kind of "non-physical" result.
A quick computation of the Bagnold number (ratio between the settling and friction velocities) can show the main tendency of your model, that is if the sediments will be prone to be transported in suspension or next to the bottom.
I hope it helps,
Best wishes,
Pablo