open TELEMAC-MASCARET The mathematically superior suite of solvers

Hi,

I tried to run in parallel, but I got the following error.


/home/applications/telemac/v7p1r0/builds/fedgfopenmpi/bin/partel: error while loading shared libraries: libmetis.so: cannot open shared object file: No such file or directoryun


The control file that I used to run in parallel is below

#BSUB -q PQ_yuying
#BSUB -a openmpi
#BSUB -m "IB_16C_96G"

#BSUB -n 2

#BSUB -oo "out"
#BSUB -eo "err"
. $MODULESHOME/../global/profile.modules
module load telemac/7.1
export NPROCS=`echo $LSB_HOSTS | wc -w`
export OMP_NUM_THREADS=$NPROCS


runcode.py telemac2d -c fedgfopenmpi -s lobster2.cas


Anyone can help me to figure out?




thanks so much,

Cristina

Hi

This looks like an installation problem on your machine.
Did you compile telemac without any problem?

Maybe some path missing in the module definition of telemac?
Or in the queuing system as it doesn't find the metis library...

hope this helps

Thanks for your reply, Yes I compiled Telemac without any problem, maybe the problem in the previous control file was the version, but now I set module load telemac/7.1.1 (the correct version), but I got this new error
Do you know which is the problem now?


/bin/sh: line 1: 13471 Segmentation fault (core dumped) /home/applications/telemac/v7p1r1/builds/fedgfopenmpi/bin/partel < PARTEL.PAR >> partel_T2DGEO.log


Really thanks so much for your help


Best regards,

Cristina

I have been trying to help Cristina get this to work. Here is some additional information about the error in the output file.

... partitioning base files (geo, conlim, sections and zones)
+> /home/applications/telemac/v7p1r1/builds/fedgfopenmpi/bin/partel < PARTEL.PAR >> partel_T2DGEO.log
runPartition:
|runPARTEL: Could not split your file T2DGEO (runcode=139) with the error as follows:
|
|... The following command failed for the reason above (or below)
|/home/applications/telemac/v7p1r1/builds/fedgfopenmpi/bin/partel < PARTEL.PAR >> partel_T2DGEO.log
|
| You may have forgotten to compile PARTEL with the appropriate compiler directive
| (add -DHAVE_MPI to your cmd_obj in your configuration file).


Attached is the config file that shows that -DHAVE_MPI is added to cmd_obj.

Thanks for your help!