Hi,
Your mesh seems ok, but I think it's a precision issue in your case.
I just shifted your coordinates and your case runs.
Xshift=-1000000
Yshift=-6260000
But now, your tide settings (commented in your steering file) and source point location shouldn't be good anymore..
For the source point, you just have to shift the coordinates also. And for tide, you can re-add the shifted coordinates before recomposing the tidal signal for instance (in tidal_model_t3d.f : see XSHIFT and YSHIFT).
Maybe using a double precision geometry file can also be a solution.
Regards,
Laurent